IL_6GAW_065
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 6GAW|1|BA|A|532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GAW_065 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.1694
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GAW|1|BA|G|531
6GAW|1|BA|A|532
6GAW|1|BA|A|533
6GAW|1|BA|A|534
*
6GAW|1|BA|U|545
6GAW|1|BA|C|546
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B9
- Ribosomal protein
- Chain BK
- Mitochondrial ribosomal protein L11
- Chain BQ
- 39S ribosomal protein L16, mitochondrial
- Chain Bp
- mL53
- Chain Bq
- mL54
Coloring options: