IL_6GAW_070

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCAAAACAACACU*AACG

Length

17 nucleotides

Bulged bases

6GAW|1|BA|C|725, 6GAW|1|BA|A|727

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|BA|C|719
6GAW|1|BA|C|720
6GAW|1|BA|A|721
6GAW|1|BA|A|722
6GAW|1|BA|A|723
6GAW|1|BA|A|724
6GAW|1|BA|C|725
6GAW|1|BA|A|726
6GAW|1|BA|A|727
6GAW|1|BA|C|728
6GAW|1|BA|A|729
6GAW|1|BA|C|730
6GAW|1|BA|U|731
*
6GAW|1|BA|A|734
6GAW|1|BA|A|735
6GAW|1|BA|C|736
6GAW|1|BA|G|737

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain BD

39S ribosomal protein L2, mitochondrial

Chain Ba

Mitochondrial ribosomal protein L37