IL_6GAW_104

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCACA*UAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|AA|G|116
6GAW|1|AA|C|117
6GAW|1|AA|A|118
6GAW|1|AA|C|119
6GAW|1|AA|A|120
*
6GAW|1|AA|U|131
6GAW|1|AA|A|132
6GAW|1|AA|G|133
6GAW|1|AA|C|134

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AO

Uncharacterized protein

Chain AQ

uS17m

Chain Aj

28S ribosomal protein S34, mitochondrial

Chain An

Aurora kinase A interacting protein 1