IL_6GAZ_018

3D structure

PDB id

6GAZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAAUUAUA*UAAAAUAAA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAZ|1|AA|U|327
6GAZ|1|AA|A|328
6GAZ|1|AA|A|329
6GAZ|1|AA|A|330
6GAZ|1|AA|U|331
6GAZ|1|AA|U|332
6GAZ|1|AA|A|333
6GAZ|1|AA|U|334
6GAZ|1|AA|A|335
*
6GAZ|1|AA|U|359
6GAZ|1|AA|A|360
6GAZ|1|AA|A|361
6GAZ|1|AA|A|362
6GAZ|1|AA|A|363
6GAZ|1|AA|U|364
6GAZ|1|AA|A|365
6GAZ|1|AA|A|366
6GAZ|1|AA|A|367

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AF

Mitochondrial ribosomal protein S6

Chain AK

Mitochondrial ribosomal protein S11

Chain AR

Mitochondrial ribosomal protein S18C

Chain AU

Mitochondrial ribosomal protein S21