IL_6GAZ_047
3D structure
- PDB id
- 6GAZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAAAAAAUCACAAU*AAUAAUCC
- Length
- 24 nucleotides
- Bulged bases
- 6GAZ|1|AA|A|309, 6GAZ|1|AA|U|315, 6GAZ|1|AA|C|316, 6GAZ|1|AA|A|319
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GAZ|1|AA|G|306
6GAZ|1|AA|A|307
6GAZ|1|AA|A|308
6GAZ|1|AA|A|309
6GAZ|1|AA|A|310
6GAZ|1|AA|A|311
6GAZ|1|AA|A|312
6GAZ|1|AA|A|313
6GAZ|1|AA|A|314
6GAZ|1|AA|U|315
6GAZ|1|AA|C|316
6GAZ|1|AA|A|317
6GAZ|1|AA|C|318
6GAZ|1|AA|A|319
6GAZ|1|AA|A|320
6GAZ|1|AA|U|321
*
6GAZ|1|AA|A|389
6GAZ|1|AA|A|390
6GAZ|1|AA|U|391
6GAZ|1|AA|A|392
6GAZ|1|AA|A|393
6GAZ|1|AA|U|394
6GAZ|1|AA|C|395
6GAZ|1|AA|C|396
Current chains
- Chain AA
- 12S ribosomal RNA, mitochondrial
Nearby chains
- Chain AF
- Mitochondrial ribosomal protein S6
- Chain AL
- Mitochondrial ribosomal protein S12
- Chain AO
- Mitochondrial ribosomal protein S15
- Chain AQ
- Mitochondrial ribosomal protein S17
- Chain AR
- Mitochondrial ribosomal protein S18C
- Chain Ac
- Mitochondrial ribosomal protein S25
- Chain Am
- Mitochondrial ribosomal protein S37
Coloring options: