IL_6GBZ_088

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAUAC*GUGUUUG

Length

13 nucleotides

Bulged bases

6GBZ|1|A|G|2458, 6GBZ|1|A|A|2459, 6GBZ|1|A|U|2493

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|U|2457
6GBZ|1|A|G|2458
6GBZ|1|A|A|2459
6GBZ|1|A|U|2460
6GBZ|1|A|A|2461
6GBZ|1|A|C|2462
*
6GBZ|1|A|G|2488
6GBZ|1|A|U|2489
6GBZ|1|A|G|2490
6GBZ|1|A|U|2491
6GBZ|1|A|U|2492
6GBZ|1|A|U|2493
6GBZ|1|A|G|2494

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain M

50S ribosomal protein L16