IL_6GBZ_126

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

6GBZ|1|A|G|914

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|856
6GBZ|1|A|G|857
6GBZ|1|A|G|858
6GBZ|1|A|G|859
6GBZ|1|A|U|860
6GBZ|1|A|A|861
6GBZ|1|A|G|862
6GBZ|1|A|A|863
*
6GBZ|1|A|U|913
6GBZ|1|A|G|914
6GBZ|1|A|C|915
6GBZ|1|A|G|916
6GBZ|1|A|A|917
6GBZ|1|A|A|918
6GBZ|1|A|U|919
6GBZ|1|A|A|920
6GBZ|1|A|C|921

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27

Chain Z

50S ribosomal protein L30