IL_6GBZ_128

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC

Length

40 nucleotides

Bulged bases

6GBZ|1|A|U|1065, 6GBZ|1|A|A|1073

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|1055
6GBZ|1|A|G|1056
6GBZ|1|A|A|1057
6GBZ|1|A|U|1058
6GBZ|1|A|G|1059
6GBZ|1|A|U|1060
6GBZ|1|A|U|1061
6GBZ|1|A|G|1062
6GBZ|1|A|G|1063
6GBZ|1|A|C|1064
6GBZ|1|A|U|1065
6GBZ|1|A|U|1066
6GBZ|1|A|A|1067
6GBZ|1|A|G|1068
6GBZ|1|A|A|1069
6GBZ|1|A|A|1070
6GBZ|1|A|G|1071
6GBZ|1|A|C|1072
6GBZ|1|A|A|1073
6GBZ|1|A|G|1074
6GBZ|1|A|C|1075
6GBZ|1|A|C|1076
6GBZ|1|A|A|1077
6GBZ|1|A|U|1078
6GBZ|1|A|C|1079
6GBZ|1|A|A|1080
6GBZ|1|A|U|1081
6GBZ|1|A|U|1082
6GBZ|1|A|U|1083
6GBZ|1|A|A|1084
6GBZ|1|A|A|1085
6GBZ|1|A|A|1086
6GBZ|1|A|G|1087
6GBZ|1|A|A|1088
6GBZ|1|A|A|1089
6GBZ|1|A|A|1090
*
6GBZ|1|A|U|1101
6GBZ|1|A|C|1102
6GBZ|1|A|A|1103
6GBZ|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains