IL_6GBZ_130

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCGAAAUUCCUUG*CCUGCAC

Length

20 nucleotides

Bulged bases

6GBZ|1|A|C|1941, 6GBZ|1|A|C|1962, 6GBZ|1|A|U|1963

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|1933
6GBZ|1|A|C|1934
6GBZ|1|A|G|1935
6GBZ|1|A|A|1936
6GBZ|1|A|A|1937
6GBZ|1|A|A|1938
6GBZ|1|A|U|1939
6GBZ|1|A|U|1940
6GBZ|1|A|C|1941
6GBZ|1|A|C|1942
6GBZ|1|A|U|1943
6GBZ|1|A|U|1944
6GBZ|1|A|G|1945
*
6GBZ|1|A|C|1961
6GBZ|1|A|C|1962
6GBZ|1|A|U|1963
6GBZ|1|A|G|1964
6GBZ|1|A|C|1965
6GBZ|1|A|A|1966
6GBZ|1|A|C|1967

Current chains

Chain A

23S ribosomal RNA

Nearby chains