3D structure

PDB id
6GC4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S ribosomal subunit assembly intermediate state 3
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
GGCAAGGG*UACCAACCC
Length
17 nucleotides
Bulged bases
6GC4|1|A|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GC4|1|A|G|874
6GC4|1|A|G|875
6GC4|1|A|C|876
6GC4|1|A|A|877
6GC4|1|A|A|878
6GC4|1|A|G|879
6GC4|1|A|G|880
6GC4|1|A|G|881
*
6GC4|1|A|U|895
6GC4|1|A|A|896
6GC4|1|A|C|897
6GC4|1|A|C|898
6GC4|1|A|A|899
6GC4|1|A|A|900
6GC4|1|A|C|901
6GC4|1|A|C|902
6GC4|1|A|C|903

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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