IL_6GC4_097

3D structure

PDB id

6GC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 3

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GGUAAG*CGUUAUAACC

Length

16 nucleotides

Bulged bases

6GC4|1|A|U|102

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC4|1|A|G|80
6GC4|1|A|G|81
6GC4|1|A|U|82
6GC4|1|A|A|83
6GC4|1|A|A|84
6GC4|1|A|G|85
*
6GC4|1|A|C|97
6GC4|1|A|G|98
6GC4|1|A|U|99
6GC4|1|A|U|100
6GC4|1|A|A|101
6GC4|1|A|U|102
6GC4|1|A|A|103
6GC4|1|A|A|104
6GC4|1|A|C|105
6GC4|1|A|C|106

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L24

Chain Y

50S ribosomal protein L29