IL_6GC4_099

3D structure

PDB id

6GC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 3

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

AAUUCA*UGUUAU

Length

12 nucleotides

Bulged bases

6GC4|1|A|U|846, 6GC4|1|A|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC4|1|A|A|844
6GC4|1|A|A|845
6GC4|1|A|U|846
6GC4|1|A|U|847
6GC4|1|A|C|848
6GC4|1|A|A|849
*
6GC4|1|A|U|929
6GC4|1|A|G|930
6GC4|1|A|U|931
6GC4|1|A|U|932
6GC4|1|A|A|933
6GC4|1|A|U|934

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30