IL_6GC4_113

3D structure

PDB id

6GC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 3

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GC4_113 not in the Motif Atlas

Homologous match to IL_9DFE_084

Geometric discrepancy: 0.2349

The information below is about IL_9DFE_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC4|1|A|A|2108
6GC4|1|A|U|2109
6GC4|1|A|G|2110
*
6GC4|1|A|C|2179
6GC4|1|A|U|2180
6GC4|1|A|U|2181

Current chains

Chain A

23S ribosomal RNA

Nearby chains