IL_6GC6_033
3D structure
- PDB id
- 6GC6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GUAAG*UAUC
- Length
- 9 nucleotides
- Bulged bases
- 6GC6|1|A|A|1205
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GC6_033 not in the Motif Atlas
- Homologous match to IL_5J7L_287
- Geometric discrepancy: 0.2337
- The information below is about IL_5J7L_287
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91920.1
- Basepair signature
- cWW-cWW-tHH-cWW
- Number of instances in this motif group
- 1
Unit IDs
6GC6|1|A|G|1202
6GC6|1|A|U|1203
6GC6|1|A|A|1204
6GC6|1|A|A|1205
6GC6|1|A|G|1206
*
6GC6|1|A|U|1240
6GC6|1|A|A|1241
6GC6|1|A|U|1242
6GC6|1|A|C|1243
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
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