IL_6GC7_084

3D structure

PDB id

6GC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CAUCACU*AAAUG

Length

12 nucleotides

Bulged bases

6GC7|1|A|A|2726

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC7|1|A|C|2678
6GC7|1|A|A|2679
6GC7|1|A|U|2680
6GC7|1|A|C|2681
6GC7|1|A|A|2682
6GC7|1|A|C|2683
6GC7|1|A|U|2684
*
6GC7|1|A|A|2725
6GC7|1|A|A|2726
6GC7|1|A|A|2727
6GC7|1|A|U|2728
6GC7|1|A|G|2729

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19