3D structure

PDB id
6GC8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S ribosomal subunit assembly intermediate - 50S rec*
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UGUAGG*CUGAGG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GC8|1|A|U|1474
6GC8|1|A|G|1475
6GC8|1|A|U|1476
6GC8|1|A|A|1477
6GC8|1|A|G|1478
6GC8|1|A|G|1479
*
6GC8|1|A|C|1512
6GC8|1|A|U|1513
6GC8|1|A|G|1514
6GC8|1|A|A|1515
6GC8|1|A|G|1516
6GC8|1|A|G|1517

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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