IL_6GC8_118
3D structure
- PDB id
- 6GC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate - 50S rec*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 6GC8|1|A|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GC8_118 not in the Motif Atlas
- Geometric match to IL_5J7L_399
- Geometric discrepancy: 0.2379
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6GC8|1|A|A|844
6GC8|1|A|A|845
6GC8|1|A|U|846
6GC8|1|A|U|847
6GC8|1|A|C|848
*
6GC8|1|A|G|930
6GC8|1|A|U|931
6GC8|1|A|U|932
6GC8|1|A|A|933
6GC8|1|A|U|934
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Z
- 50S ribosomal protein L30
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