IL_6GC8_146

3D structure

PDB id

6GC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate - 50S rec*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

6GC8|1|A|C|2164, 6GC8|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC8|1|A|G|2124
6GC8|1|A|G|2125
6GC8|1|A|A|2126
6GC8|1|A|G|2127
*
6GC8|1|A|C|2161
6GC8|1|A|G|2162
6GC8|1|A|A|2163
6GC8|1|A|C|2164
6GC8|1|A|C|2165
6GC8|1|A|U|2166
6GC8|1|A|U|2167
6GC8|1|A|G|2168
6GC8|1|A|A|2169
6GC8|1|A|A|2170
6GC8|1|A|A|2171
6GC8|1|A|U|2172
6GC8|1|A|A|2173
6GC8|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains