IL_6GQ1_053
3D structure
- PDB id
- 6GQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- UCUAGACAGC*GCCGAA
- Length
- 16 nucleotides
- Bulged bases
- 6GQ1|1|1|A|1221
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GQ1|1|1|U|1218
6GQ1|1|1|C|1219
6GQ1|1|1|U|1220
6GQ1|1|1|A|1221
6GQ1|1|1|G|1222
6GQ1|1|1|A|1223
6GQ1|1|1|C|1224
6GQ1|1|1|A|1225
6GQ1|1|1|G|1226
6GQ1|1|1|C|1227
*
6GQ1|1|1|G|1282
6GQ1|1|1|C|1283
6GQ1|1|1|C|1284
6GQ1|1|1|G|1285
6GQ1|1|1|A|1286
6GQ1|1|1|A|1287
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain P0
- 60S acidic ribosomal protein P0
- Chain S
- 60S ribosomal protein L20-A
- Chain m
- Ubiquitin-60S ribosomal protein L40
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