IL_6GQ1_087
3D structure
- PDB id
- 6GQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- GUCAAAGU*AACCAAGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GQ1|1|1|G|2210
6GQ1|1|1|U|2211
6GQ1|1|1|C|2212
6GQ1|1|1|A|2213
6GQ1|1|1|A|2214
6GQ1|1|1|A|2215
6GQ1|1|1|G|2216
6GQ1|1|1|U|2217
*
6GQ1|1|1|A|2228
6GQ1|1|1|A|2229
6GQ1|1|1|C|2230
6GQ1|1|1|C|2231
6GQ1|1|1|A|2232
6GQ1|1|1|A|2233
6GQ1|1|1|G|2234
6GQ1|1|1|C|2235
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain AX
- Transfer RNA; tRNA
- Chain i
- 60S ribosomal protein L36-A
- Chain o
- 60S ribosomal protein L42-A
Coloring options: