IL_6GQV_165

3D structure

PDB id

6GQV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

6GQV|1|2|C|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GQV|1|2|G|652
6GQV|1|2|C|653
6GQV|1|2|C|654
6GQV|1|2|G|655
6GQV|1|2|G|656
6GQV|1|2|U|657
6GQV|1|2|C|658
*
6GQV|1|2|G|676
6GQV|1|2|G|677
6GQV|1|2|A|678
6GQV|1|2|U|679
6GQV|1|2|U|680
6GQV|1|2|U|681
6GQV|1|2|C|682

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain z

40S ribosomal protein S9-A