IL_6GSJ_040

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GAAC*GGUGCCCCGCGAGGGGAGC

Length

23 nucleotides

Bulged bases

6GSJ|1|13|C|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|13|G|1003
6GSJ|1|13|A|1004
6GSJ|1|13|A|1005
6GSJ|1|13|C|1006
*
6GSJ|1|13|G|1023
6GSJ|1|13|G|1024
6GSJ|1|13|U|1025
6GSJ|1|13|G|1026
6GSJ|1|13|C|1027
6GSJ|1|13|C|1028
6GSJ|1|13|C|1028|||A
6GSJ|1|13|C|1028|||B
6GSJ|1|13|G|1029
6GSJ|1|13|C|1030
6GSJ|1|13|G|1031
6GSJ|1|13|A|1032
6GSJ|1|13|G|1032|||A
6GSJ|1|13|G|1032|||B
6GSJ|1|13|G|1033
6GSJ|1|13|G|1034
6GSJ|1|13|A|1035
6GSJ|1|13|G|1036
6GSJ|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3