IL_6GSJ_217

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

6GSJ|1|1G|U|1125, 6GSJ|1|1G|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|1G|G|1124
6GSJ|1|1G|U|1125
6GSJ|1|1G|U|1126
6GSJ|1|1G|G|1127
6GSJ|1|1G|C|1128
6GSJ|1|1G|C|1129
6GSJ|1|1G|A|1130
6GSJ|1|1G|G|1131
6GSJ|1|1G|C|1132
*
6GSJ|1|1G|G|1142
6GSJ|1|1G|G|1143
6GSJ|1|1G|G|1144
6GSJ|1|1G|C|1145
6GSJ|1|1G|A|1146
6GSJ|1|1G|C|1147
6GSJ|1|1G|U|1148
6GSJ|1|1G|C|1149

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1A

30S ribosomal protein S10

Chain 82

30S ribosomal protein S9