IL_6GSJ_350

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GGCUAAGUG*CUUAAGCC

Length

17 nucleotides

Bulged bases

6GSJ|1|14|U|1142, 6GSJ|1|14|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|14|G|1016
6GSJ|1|14|G|1017
6GSJ|1|14|C|1018
6GSJ|1|14|U|1019
6GSJ|1|14|A|1020
6GSJ|1|14|A|1021
6GSJ|1|14|G|1022
6GSJ|1|14|U|1023
6GSJ|1|14|G|1024
*
6GSJ|1|14|C|1140
6GSJ|1|14|U|1141
6GSJ|1|14|U|1142
6GSJ|1|14|A|1142|||A
6GSJ|1|14|A|1143
6GSJ|1|14|G|1144
6GSJ|1|14|C|1145
6GSJ|1|14|C|1146

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 59

50S ribosomal protein L6