IL_6GSJ_353

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

CCUGUGAAC*GGGAGG

Length

15 nucleotides

Bulged bases

6GSJ|1|14|G|2131, 6GSJ|1|14|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|14|C|2128
6GSJ|1|14|C|2129
6GSJ|1|14|U|2130
6GSJ|1|14|G|2131
6GSJ|1|14|U|2132
6GSJ|1|14|G|2133
6GSJ|1|14|A|2134
6GSJ|1|14|A|2135
6GSJ|1|14|C|2136
*
6GSJ|1|14|G|2155
6GSJ|1|14|G|2156
6GSJ|1|14|G|2157
6GSJ|1|14|A|2158
6GSJ|1|14|G|2159
6GSJ|1|14|G|2160

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA