IL_6GSK_094

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

GCUAAGUG*CUUAAGC

Length

15 nucleotides

Bulged bases

6GSK|1|14|U|1142, 6GSK|1|14|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|14|G|1017
6GSK|1|14|C|1018
6GSK|1|14|U|1019
6GSK|1|14|A|1020
6GSK|1|14|A|1021
6GSK|1|14|G|1022
6GSK|1|14|U|1023
6GSK|1|14|G|1024
*
6GSK|1|14|C|1140
6GSK|1|14|U|1141
6GSK|1|14|U|1142
6GSK|1|14|A|1142|||A
6GSK|1|14|A|1143
6GSK|1|14|G|1144
6GSK|1|14|C|1145

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 59

50S ribosomal protein L6