IL_6GSK_151

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

UUGAGG*CCAAGAUGAG

Length

16 nucleotides

Bulged bases

6GSK|1|14|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|14|U|2636
6GSK|1|14|U|2637
6GSK|1|14|G|2638
6GSK|1|14|A|2639
6GSK|1|14|G|2640
6GSK|1|14|G|2641
*
6GSK|1|14|C|2773
6GSK|1|14|C|2774
6GSK|1|14|A|2775
6GSK|1|14|A|2776
6GSK|1|14|G|2777
6GSK|1|14|A|2778
6GSK|1|14|U|2779
6GSK|1|14|G|2780
6GSK|1|14|A|2781
6GSK|1|14|G|2782

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 29

50S ribosomal protein L3