IL_6GSK_264

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

GCCAGGAAAUG*CUCACUGGU

Length

20 nucleotides

Bulged bases

6GSK|1|1H|A|1084

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|1H|G|1051
6GSK|1|1H|C|1052
6GSK|1|1H|C|1053
6GSK|1|1H|A|1054
6GSK|1|1H|G|1055
6GSK|1|1H|G|1056
6GSK|1|1H|A|1084
6GSK|1|1H|A|1085
6GSK|1|1H|A|1086
6GSK|1|1H|U|1090
6GSK|1|1H|G|1091
*
6GSK|1|1H|C|1100
6GSK|1|1H|U|1101
6GSK|1|1H|C|1102
6GSK|1|1H|A|1103
6GSK|1|1H|C|1104
6GSK|1|1H|U|1105
6GSK|1|1H|G|1106
6GSK|1|1H|G|1107
6GSK|1|1H|U|1108

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6