IL_6GSK_343

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

GGGGAG*UCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|13|G|773
6GSK|1|13|G|774
6GSK|1|13|G|775
6GSK|1|13|G|776
6GSK|1|13|A|777
6GSK|1|13|G|778
*
6GSK|1|13|U|804
6GSK|1|13|C|805
6GSK|1|13|C|806

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L2

Chain 1H

Large subunit ribosomal RNA; LSU rRNA

Chain 2I

30S ribosomal protein S11