3D structure

PDB id
6GSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.36 Å

Loop

Sequence
GUUGCCAGC*GGGCACUC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GSK|1|1G|G|1124
6GSK|1|1G|U|1125
6GSK|1|1G|U|1126
6GSK|1|1G|G|1127
6GSK|1|1G|C|1128
6GSK|1|1G|C|1129
6GSK|1|1G|A|1130
6GSK|1|1G|G|1131
6GSK|1|1G|C|1132
*
6GSK|1|1G|G|1142
6GSK|1|1G|G|1143
6GSK|1|1G|G|1144
6GSK|1|1G|C|1145
6GSK|1|1G|A|1146
6GSK|1|1G|C|1147
6GSK|1|1G|U|1148
6GSK|1|1G|C|1149

Current chains

Chain 1G
16S ribosomal RNA

Nearby chains

Chain 1A
30S ribosomal protein S10
Chain 82
30S ribosomal protein S9

Coloring options:

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