IL_6GSL_039

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

GAAC*GGUGCCCCGCGAGGGGAGC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSL|1|13|G|1003
6GSL|1|13|A|1004
6GSL|1|13|A|1005
6GSL|1|13|C|1006
*
6GSL|1|13|G|1023
6GSL|1|13|G|1024
6GSL|1|13|U|1025
6GSL|1|13|G|1026
6GSL|1|13|C|1027
6GSL|1|13|C|1028
6GSL|1|13|C|1028|||A
6GSL|1|13|C|1028|||B
6GSL|1|13|G|1029
6GSL|1|13|C|1030
6GSL|1|13|G|1031
6GSL|1|13|A|1032
6GSL|1|13|G|1032|||A
6GSL|1|13|G|1032|||B
6GSL|1|13|G|1033
6GSL|1|13|G|1034
6GSL|1|13|A|1035
6GSL|1|13|G|1036
6GSL|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3