IL_6GSL_142

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

GCCUGUGAAC*GGGAGGC

Length

17 nucleotides

Bulged bases

6GSL|1|14|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSL|1|14|G|2127
6GSL|1|14|C|2128
6GSL|1|14|C|2129
6GSL|1|14|U|2130
6GSL|1|14|G|2131
6GSL|1|14|U|2132
6GSL|1|14|G|2133
6GSL|1|14|A|2134
6GSL|1|14|A|2135
6GSL|1|14|C|2136
*
6GSL|1|14|G|2155
6GSL|1|14|G|2156
6GSL|1|14|G|2157
6GSL|1|14|A|2158
6GSL|1|14|G|2159
6GSL|1|14|G|2160
6GSL|1|14|C|2161

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 79

50S ribosomal protein L1