IL_6GSN_040

3D structure

PDB id

6GSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a partial yeast 48S preinitiation complex in closed conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

5.75 Å

Loop

Sequence

GCUAACCUGUA*UGCAGGCGAAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSN|1|2|G|703
6GSN|1|2|C|704
6GSN|1|2|U|705
6GSN|1|2|A|706
6GSN|1|2|A|707
6GSN|1|2|C|708
6GSN|1|2|C|709
6GSN|1|2|U|710
6GSN|1|2|G|711
6GSN|1|2|U|712
6GSN|1|2|A|713
*
6GSN|1|2|U|725
6GSN|1|2|G|726
6GSN|1|2|C|727
6GSN|1|2|A|728
6GSN|1|2|G|729
6GSN|1|2|G|730
6GSN|1|2|C|731
6GSN|1|2|G|732
6GSN|1|2|A|733
6GSN|1|2|A|734
6GSN|1|2|C|735

Current chains

Chain 2

18S rRNA (1798-MER)

Nearby chains

Chain E

40S ribosomal protein S4