IL_6GWT_055

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GWT_055 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3591

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.2

Basepair signature

cWW-tSH-tHW-L-R-cWW-cWW

Number of instances in this motif group

6

Unit IDs

6GWT|1|A|U|1474
6GWT|1|A|G|1475
6GWT|1|A|U|1476
6GWT|1|A|A|1477
6GWT|1|A|G|1478
6GWT|1|A|G|1479
*
6GWT|1|A|C|1512
6GWT|1|A|U|1513
6GWT|1|A|G|1514
6GWT|1|A|A|1515
6GWT|1|A|G|1516
6GWT|1|A|G|1517

Current chains

Chain A

23S ribosomal RNA

Nearby chains