IL_6GWT_179

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6GWT|1|A|U|276, 6GWT|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6GWT_179 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2933

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6GWT|1|A|C|274
6GWT|1|A|C|275
6GWT|1|A|U|276
6GWT|1|A|G|277
6GWT|1|A|A|278
6GWT|1|A|A|279
6GWT|1|A|U|280
6GWT|1|A|C|281
*
6GWT|1|A|G|359
6GWT|1|A|U|360
6GWT|1|A|G|361
6GWT|1|A|A|362
6GWT|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains