3D structure

PDB id
6GWT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC
Length
40 nucleotides
Bulged bases
6GWT|1|A|U|1061, 6GWT|1|A|C|1064, 6GWT|1|A|U|1065, 6GWT|1|A|U|1066, 6GWT|1|A|A|1070, 6GWT|1|A|U|1078
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GWT|1|A|G|1055
6GWT|1|A|G|1056
6GWT|1|A|A|1057
6GWT|1|A|U|1058
6GWT|1|A|G|1059
6GWT|1|A|U|1060
6GWT|1|A|U|1061
6GWT|1|A|G|1062
6GWT|1|A|G|1063
6GWT|1|A|C|1064
6GWT|1|A|U|1065
6GWT|1|A|U|1066
6GWT|1|A|A|1067
6GWT|1|A|G|1068
6GWT|1|A|A|1069
6GWT|1|A|A|1070
6GWT|1|A|G|1071
6GWT|1|A|C|1072
6GWT|1|A|A|1073
6GWT|1|A|G|1074
6GWT|1|A|C|1075
6GWT|1|A|C|1076
6GWT|1|A|A|1077
6GWT|1|A|U|1078
6GWT|1|A|C|1079
6GWT|1|A|A|1080
6GWT|1|A|U|1081
6GWT|1|A|U|1082
6GWT|1|A|U|1083
6GWT|1|A|A|1084
6GWT|1|A|A|1085
6GWT|1|A|A|1086
6GWT|1|A|G|1087
6GWT|1|A|A|1088
6GWT|1|A|A|1089
6GWT|1|A|A|1090
*
6GWT|1|A|U|1101
6GWT|1|A|C|1102
6GWT|1|A|A|1103
6GWT|1|A|C|1104

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain 5
50S ribosomal protein L10
Chain I
50S ribosomal protein L11
Chain M
50S ribosomal protein L16

Coloring options:

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