IL_6GXO_192

3D structure

PDB id

6GXO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUGUGUAGGAUAGGUGG*CCACCCUU

Length

25 nucleotides

Bulged bases

6GXO|1|A|U|2111, 6GXO|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXO|1|A|A|2108
6GXO|1|A|U|2109
6GXO|1|A|G|2110
6GXO|1|A|U|2111
6GXO|1|A|G|2112
6GXO|1|A|U|2113
6GXO|1|A|A|2114
6GXO|1|A|G|2115
6GXO|1|A|G|2116
6GXO|1|A|A|2117
6GXO|1|A|U|2118
6GXO|1|A|A|2119
6GXO|1|A|G|2120
6GXO|1|A|G|2121
6GXO|1|A|U|2122
6GXO|1|A|G|2123
6GXO|1|A|G|2124
*
6GXO|1|A|C|2174
6GXO|1|A|C|2175
6GXO|1|A|A|2176
6GXO|1|A|C|2177
6GXO|1|A|C|2178
6GXO|1|A|C|2179
6GXO|1|A|U|2180
6GXO|1|A|U|2181

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain x

Transfer RNA; tRNA