IL_6GXP_040
3D structure
- PDB id
- 6GXP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC
- Length
- 36 nucleotides
- Bulged bases
- 6GXP|1|A|U|1061, 6GXP|1|A|U|1065, 6GXP|1|A|U|1066, 6GXP|1|A|A|1070, 6GXP|1|A|U|1078
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GXP|1|A|G|1055
6GXP|1|A|G|1056
6GXP|1|A|A|1057
6GXP|1|A|U|1058
6GXP|1|A|G|1059
6GXP|1|A|U|1060
6GXP|1|A|U|1061
6GXP|1|A|G|1062
6GXP|1|A|G|1063
6GXP|1|A|C|1064
6GXP|1|A|U|1065
6GXP|1|A|U|1066
6GXP|1|A|A|1067
6GXP|1|A|G|1068
6GXP|1|A|A|1069
6GXP|1|A|A|1070
6GXP|1|A|G|1071
6GXP|1|A|C|1072
6GXP|1|A|A|1073
6GXP|1|A|G|1074
6GXP|1|A|C|1075
6GXP|1|A|C|1076
6GXP|1|A|A|1077
6GXP|1|A|U|1078
6GXP|1|A|C|1079
6GXP|1|A|A|1080
6GXP|1|A|U|1081
6GXP|1|A|U|1082
6GXP|1|A|U|1083
6GXP|1|A|A|1084
6GXP|1|A|A|1085
6GXP|1|A|A|1086
6GXP|1|A|G|1087
*
6GXP|1|A|C|1102
6GXP|1|A|A|1103
6GXP|1|A|C|1104
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain 5
- 50S ribosomal protein L10
- Chain I
- 50S ribosomal protein L11
Coloring options: