IL_6GXP_146

3D structure

PDB id

6GXP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AGAAUU*AGGAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXP|1|a|A|673
6GXP|1|a|G|674
6GXP|1|a|A|675
6GXP|1|a|A|676
6GXP|1|a|U|677
6GXP|1|a|U|678
*
6GXP|1|a|A|712
6GXP|1|a|G|713
6GXP|1|a|G|714
6GXP|1|a|A|715
6GXP|1|a|A|716
6GXP|1|a|U|717

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain f

30S ribosomal protein S6

Chain k

30S ribosomal protein S11

Chain r

30S ribosomal protein S18

Chain u

30S ribosomal protein S21