IL_6GZ3_096

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUGAAG*UGGAG

Length

12 nucleotides

Bulged bases

6GZ3|1|A2|U|2284

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|C|2282
6GZ3|1|A2|U|2283
6GZ3|1|A2|U|2284
6GZ3|1|A2|G|2285
6GZ3|1|A2|A|2286
6GZ3|1|A2|A|2287
6GZ3|1|A2|G|2288
*
6GZ3|1|A2|U|2308
6GZ3|1|A2|G|2309
6GZ3|1|A2|G|2310
6GZ3|1|A2|A|2311
6GZ3|1|A2|G|2312

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain AC

ribosomal protein uL4

Chain AP

ribosomal protein uL22

Chain AY

Ribosomal protein L26

Chain Ae

ribosomal protein eL32