IL_6GZ3_167

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAAACGG*CCUCGCC

Length

15 nucleotides

Bulged bases

6GZ3|1|A2|C|4884, 6GZ3|1|A2|G|4885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|G|4848
6GZ3|1|A2|G|4849
6GZ3|1|A2|A|4850
6GZ3|1|A2|A|4851
6GZ3|1|A2|A|4852
6GZ3|1|A2|C|4853
6GZ3|1|A2|G|4854
6GZ3|1|A2|G|4855
*
6GZ3|1|A2|C|4881
6GZ3|1|A2|C|4882
6GZ3|1|A2|U|4883
6GZ3|1|A2|C|4884
6GZ3|1|A2|G|4885
6GZ3|1|A2|C|4886
6GZ3|1|A2|C|4887

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AE

ribosomal protein eL6

Chain AM

ribosomal protein eL14

Chain AO

ribosomal protein uL13