IL_6GZ3_254
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGAUCG*CAUGAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ3_254 not in the Motif Atlas
- Homologous match to IL_8C3A_469
- Geometric discrepancy: 0.1289
- The information below is about IL_8C3A_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10092.1
- Basepair signature
- cWW-tSH-tSH-L-R-cWW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
6GZ3|1|B1|G|1604
6GZ3|1|B1|G|1605
6GZ3|1|B1|G|1606
6GZ3|1|B1|A|1607
6GZ3|1|B1|U|1608
6GZ3|1|B1|C|1609
6GZ3|1|B1|G|1610
*
6GZ3|1|B1|C|1629
6GZ3|1|B1|A|1630
6GZ3|1|B1|U|1631
6GZ3|1|B1|G|1632
6GZ3|1|B1|A|1633
6GZ3|1|B1|A|1634
6GZ3|1|B1|C|1635
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BF
- Ribosomal protein S5
- Chain BS
- ribosomal protein uS13
- Chain BT
- ribosomal protein eS19
- Chain BZ
- ribosomal protein eS25
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