IL_6GZ3_258

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

6GZ3|1|B1|A|1824, 6GZ3|1|B1|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|B1|C|1708
6GZ3|1|B1|G|1709
6GZ3|1|B1|C|1710
6GZ3|1|B1|U|1711
*
6GZ3|1|B1|A|1822
6GZ3|1|B1|A|1823
6GZ3|1|B1|A|1824
6GZ3|1|B1|A|1825
6GZ3|1|B1|G|1826

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain BX

Ribosomal protein S23

Chain Bx

mRNA

Chain Ct

eukaryotic elongation factor 2 (eEF2)