IL_6GZ3_278

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|C|4428
6GZ3|1|A2|A|4429
6GZ3|1|A2|U|4430
6GZ3|1|A2|U|4431
6GZ3|1|A2|G|4432
*
6GZ3|1|A2|C|4447
6GZ3|1|A2|C|4448
6GZ3|1|A2|A|4449
6GZ3|1|A2|A|4450
6GZ3|1|A2|G|4451
6GZ3|1|A2|C|4452
6GZ3|1|A2|G|4453

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

ribosomal protein uL3

Chain AH

ribosomal protein uL6

Chain AO

ribosomal protein uL13

Chain AV

Ribosomal protein L23

Chain Am

ribosomal protein eL40