3D structure

PDB id
6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CUCCCCG*CGCCCG
Length
13 nucleotides
Bulged bases
6GZ5|1|A2|C|169
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZ5|1|A2|C|167
6GZ5|1|A2|U|168
6GZ5|1|A2|C|169
6GZ5|1|A2|C|170
6GZ5|1|A2|C|171
6GZ5|1|A2|C|172
6GZ5|1|A2|G|173
*
6GZ5|1|A2|C|256
6GZ5|1|A2|G|257
6GZ5|1|A2|C|258
6GZ5|1|A2|C|259
6GZ5|1|A2|C|260
6GZ5|1|A2|G|261

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain AL
ribosomal protein eL13
Chain Ah
ribosomal protein uL29

Coloring options:

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