IL_6GZ5_045

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGCC

Length

20 nucleotides

Bulged bases

6GZ5|1|A2|A|737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|A2|G|736
6GZ5|1|A2|A|737
6GZ5|1|A2|A|738
6GZ5|1|A2|G|739
6GZ5|1|A2|G|740
6GZ5|1|A2|U|741
6GZ5|1|A2|G|742
6GZ5|1|A2|G|743
6GZ5|1|A2|C|744
*
6GZ5|1|A2|G|897
6GZ5|1|A2|U|898
6GZ5|1|A2|G|899
6GZ5|1|A2|U|900
6GZ5|1|A2|U|901
6GZ5|1|A2|A|902
6GZ5|1|A2|C|903
6GZ5|1|A2|A|904
6GZ5|1|A2|G|905
6GZ5|1|A2|C|906
6GZ5|1|A2|C|907

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AH

ribosomal protein uL6

Chain AM

ribosomal protein eL14

Chain AS

ribosomal protein eL20