IL_6GZ5_087

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGGCC*GGAAUC

Length

12 nucleotides

Bulged bases

6GZ5|1|A2|G|1956

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|A2|G|1954
6GZ5|1|A2|U|1955
6GZ5|1|A2|G|1956
6GZ5|1|A2|G|1957
6GZ5|1|A2|C|1958
6GZ5|1|A2|C|1959
*
6GZ5|1|A2|G|1969
6GZ5|1|A2|G|1970
6GZ5|1|A2|A|1971
6GZ5|1|A2|A|1972
6GZ5|1|A2|U|1973
6GZ5|1|A2|C|1974

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AI

ribosomal protein uL16

Chain AK

ribosomal protein uL10

Chain Aq

ribosomal protein uL11