IL_6GZ5_097

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAACA*UGAA

Length

10 nucleotides

Bulged bases

6GZ5|1|A2|A|2407

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|A2|U|2394
6GZ5|1|A2|G|2395
6GZ5|1|A2|A|2396
6GZ5|1|A2|A|2397
6GZ5|1|A2|C|2398
6GZ5|1|A2|A|2399
*
6GZ5|1|A2|U|2405
6GZ5|1|A2|G|2406
6GZ5|1|A2|A|2407
6GZ5|1|A2|A|2408

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AP

ribosomal protein uL22

Chain AR

ribosomal protein eL19

Chain Al

ribosomal protein eL39