IL_6GZ5_106
3D structure
- PDB id
- 6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCC*GGG
- Length
- 7 nucleotides
- Bulged bases
- 6GZ5|1|A2|G|2631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ5_106 not in the Motif Atlas
- Geometric match to IL_406D_002
- Geometric discrepancy: 0.243
- The information below is about IL_406D_002
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
6GZ5|1|A2|C|2630
6GZ5|1|A2|G|2631
6GZ5|1|A2|C|2632
6GZ5|1|A2|C|2633
*
6GZ5|1|A2|G|2659
6GZ5|1|A2|G|2660
6GZ5|1|A2|G|2661
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AZ
- ribosomal protein eL27
- Chain Ac
- ribosomal protein eL30
- Chain Ag
- ribosomal protein eL34
- Chain Ap
- ribosomal protein eL43
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