IL_6GZ5_197
3D structure
- PDB id
- 6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 6GZ5|1|B1|U|368, 6GZ5|1|B1|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ5_197 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.292
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6GZ5|1|B1|U|366
6GZ5|1|B1|U|367
6GZ5|1|B1|U|368
6GZ5|1|B1|C|369
6GZ5|1|B1|G|370
6GZ5|1|B1|A|371
*
6GZ5|1|B1|U|393
6GZ5|1|B1|G|394
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AR
- ribosomal protein eL19
- Chain BI
- ribosomal protein eS8
- Chain BL
- ribosomal protein uS17
Coloring options: